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List of SRA Samples. 2732624 found.

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# Accession Organism Title Attributes Links
1. SRS2606255 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1, hokB mutant, T1491986C, Tyr29(TAC)>Cys29(TGC)
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 0.62

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2. SRS2606254 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1, hokB mutant, T1491986C, Tyr29(TAC)>Cys29(TGC)
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 0.598

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3. SRS2606253 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 1.866

382251

4. SRS2606252 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 1.892

382251

5. SRS2606251 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 1.58

382251

6. SRS2606250 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 0.81

382251

7. SRS2606249 Escherichia coli Microbe sample from Escherichia coli
strain: MG1655-EcM2.1
isolation_source: E. coli lab culture grown in LB
collection_date: 19-Jul-2016
geo_loc_name: Israel
sample_type: E. coli lab culture grown in LB
collected_by: Dan Bar Yaacov
OD: 0.225

382251

8. SRS2605957 Prionace glauca Model organism or animal sample from Prionace glauca
strain: not applicable
isolate: not applicable
breed: not applicable
cultivar: not applicable
ecotype: not applicable
age: not applicable
dev_stage: Immature
sex: male
tissue: Spleen
biomaterial_provider: Collected in wild
collected_by: Gonzalo Mucientes
collection_date: 2014-06-14
death_date: 2014-06-14
geo_loc_name: Atlantic Ocean
lat_lon: 41.58 N 44.07 W
breed: Blue Shark
samp_size: 152 cm fork length
env_package: Water
env_material: Sea water (ENVO:00002149)
env_feature: Ocean (ENVO:00000015)
env_biome: Sea water (ENVO:00002149)
investigation_type: eukaryote

414891

9. SRS2605958 Prionace glauca Model organism or animal sample from Prionace glauca
strain: not applicable
isolate: not applicable
breed: not applicable
cultivar: not applicable
ecotype: not applicable
age: not applicable
dev_stage: Immature
sex: male
tissue: Kidney
biomaterial_provider: Collected in wild
collected_by: Gonzalo Mucientes
collection_date: 2014-06-14
death_date: 2014-06-14
geo_loc_name: Atlantic Ocean
lat_lon: 41.58 N 44.07 W
breed: Blue Shark
samp_size: 152 cm fork length
env_package: Water
env_material: Sea water (ENVO:00002149)
env_feature: Ocean (ENVO:00000015)
env_biome: Sea water (ENVO:00002149)
investigation_type: eukaryote

414891

10. SRS2605622 Mycobacterium tuberculosis Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis
Biosample: MTBTS7
strain: missing
isolate: missing
collected_by: Unit of Infectious Diseases, Dept of Medical, Surgical and Health Sciences, University of Trieste
collection_date: 2016
geo_loc_name: Italy
host: Homo sapiens
host_disease: Tuberculosis
isolation_source: Not applicable
lat_lon: Not collected

414753

11. SRS2605623 Mycobacterium tuberculosis Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis
Biosample: MTBTS3_S24
strain: missing
isolate: missing
collected_by: Unit of Infectious Diseases, Dept of Medical, Surgical and Health Sciences, University of Trieste
collection_date: 2016
geo_loc_name: Italy
host: Homo sapiens
host_disease: Tuberculosis
isolation_source: Not applicable
lat_lon: Not collected

414753

12. SRS2605624 Mycobacterium tuberculosis Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis
Biosample: MTBTS2_S23
strain: missing
isolate: missing
collected_by: Unit of Infectious Diseases, Dept of Medical, Surgical and Health Sciences, University of Trieste
collection_date: 2016
geo_loc_name: Italy
host: Homo sapiens
host_disease: Tuberculosis
isolation_source: Not applicable
lat_lon: Not collected

414753

13. SRS2605625 Mycobacterium tuberculosis Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis
Biosample: MTBTS1_S22
strain: missing
isolate: missing
collected_by: Unit of Infectious Diseases, Dept of Medical, Surgical and Health Sciences, University of Trieste
collection_date: 2016
geo_loc_name: Italy
host: Homo sapiens
host_disease: Tuberculosis
isolation_source: Not applicable
lat_lon: Not collected

414753

14. SRS2605529 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA10from20to24_CCAGCCTCAAC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 20to24cm
description: Bacteria_AlinenMustajarvi_coreA_MA10from20to24_CCAGCCTCAAC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA10from20to24_CCAGCCTCAAC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
15. SRS2605522 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA11from24to26_CTTGGTTATTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 24to26cm
description: Bacteria_AlinenMustajarvi_coreA_MA11from24to26_CTTGGTTATTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA11from24to26_CTTGGTTATTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
16. SRS2605521 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA1from0to2_TTCCTGCTTCAC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 0to2cm
description: Bacteria_AlinenMustajarvi_coreA_MA1from0to2_TTCCTGCTTCAC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA1from0to2_TTCCTGCTTCAC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
17. SRS2605531 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA2from2to4_CGAAGCGATTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 2to4cm
description: Bacteria_AlinenMustajarvi_coreA_MA2from2to4_CGAAGCGATTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA2from2to4_CGAAGCGATTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
18. SRS2605530 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA3from4to6_CAGCCAATTCTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 4to6cm
description: Bacteria_AlinenMustajarvi_coreA_MA3from4to6_CAGCCAATTCTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA3from4to6_CAGCCAATTCTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
19. SRS2605534 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA4from6to8_CCTGGTTGTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 6to8cm
description: Bacteria_AlinenMustajarvi_coreA_MA4from6to8_CCTGGTTGTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA4from6to8_CCTGGTTGTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
20. SRS2605520 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA5from8to10_TCGAAGGCAGGC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 8to10cm
description: Bacteria_AlinenMustajarvi_coreA_MA5from8to10_TCGAAGGCAGGC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA5from8to10_TCGAAGGCAGGC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
21. SRS2605518 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA6from10to12_CCTGCCATTCGC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 10to12cm
description: Bacteria_AlinenMustajarvi_coreA_MA6from10to12_CCTGCCATTCGC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA6from10to12_CCTGCCATTCGC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
22. SRS2605515 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA7from12to15_TTGGCATCTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 12to15cm
description: Bacteria_AlinenMustajarvi_coreA_MA7from12to15_TTGGCATCTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA7from12to15_TTGGCATCTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
23. SRS2605533 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA8from16to18_CTAGGACATTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 16to18cm
description: Bacteria_AlinenMustajarvi_coreA_MA8from16to18_CTAGGACATTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA8from16to18_CTAGGACATTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
24. SRS2605525 freshwater metagenome Bacteria_AlinenMustajarvi_coreA_MA9from18to20_CTTCCATAAC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 18to20cm
description: Bacteria_AlinenMustajarvi_coreA_MA9from18to20_CTTCCATAAC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreA_MA9from18to20_CTTCCATAAC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
25. SRS2605514 freshwater metagenome Bacteria_AlinenMustajarvi_coreB_MB10from20to26_TTAAGCGGTC.AGAGTTTGATCMTGGCTCAG
collection_date: Apr-2012
depth: 20to26cm
description: Bacteria_AlinenMustajarvi_coreB_MB10from20to26_TTAAGCGGTC.AGAGTTTGATCMTGGCTCAG
elev: missing
env_biome: lake
env_feature: lake
env_material: sediment
geo_loc_name: Finland: Hameenlinna: Evo forest area in city
lat_lon: 61.20 N 25.10 E
organism: freshwater metagenome
sample_title: Bacteria_AlinenMustajarvi_coreB_MB10from20to26_TTAAGCGGTC.AGAGTTTGATCMTGGCTCAG
seq_methods: PCR of DNA. Sequencing of PCR amplicons using Ion Torrent PGM
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