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Sequence-based discovery of a cord colitis syndrome-associated Bradyrhizobium

Identifiers: SRA: SRP018116
BioProject: PRJNA174084
Study Type: 
Metagenomics
Abstract: The goal of this project was to identify a potential bacterial cause of a stem-cell transplantation colitis syndrome called cord colitis syndrome. DNA sequencing of colon biopsy samples of affected patients was performed and the non-human sequences were assembled to identify any novel organisms associated with the disease. This approach resulted in the assembly of a draft genome of a strain isolated from two temporally separated colonic biopsies of a single patient with cord colitis syndrome.
Center Project: Bradyrhizobium sp. DFCI-1

Related SRA data

Experiments:
5 ( 1 samples )
Runs:
5 (818.7Mbp; 515.4Mb)