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An Evaluation of Sequence Capture Technologies with Polyploid Cotton

Identifiers: SRA: SRP009879
BYU-DNASC-UL: Cotton_Sequence_Capture_Pilot
Study Type: 
Whole Genome Sequencing
Abstract: Sequence capture is a revolutionary method to resequence targeted portions of the genome but it has not been tested with a polyploid plant. We constructed two capture platforms 1) a novel Nimblegen sequence capture microarray and 2) Mycroarray beads containing RNA probes. Both platforms targeted the same 534 genes. On each platform, we hybridized two different accessions to this microarray to assess capture efficiency and potential of combined sequence using DNA multiplex identifiers (MIDs). For more information, visit http://www.gossypium.info

Related SRA data

Experiments:
8 ( 8 samples )
Runs:
8 (804.2Mbp; 1.7Gb)