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Download for Experiment SRX000001


What can the filter be applied to?
  • Sequence substring: one of the biological reads for a spot should contain the substring
    String length limited to 29 characters in 4NA alphabet (includes IUPAC substitution codes) or 61 characters in 2NA alphabet (ACGT only). Search is case insensitive and strings may be combined with boolean operators & | ! (AND, OR, NOT)
    See "SRA nucleotide search expressions" for more details.
    Maximum size of Run to be search is 1.1G
  • Name of a spot you are looking for.
    Example: EXWA4RL02G9Z6H
  • Name of sample pool member, or "all" for all members.
    Example: M12_V2 will return all spots assigned to the sample pool member M12_V2 for experiment SRX014738.

Please note that the filter searches across read boundaries within each spot. Thus, pattern matches within technical reads and across paired-end data boundaries will also be returned.

Download Format

Accession # of bases # of spots
total filtered
SRR000021 82.8M 304.9k
SRR000026 131.9M 480.8k
SRR000027 128.7M 471.0k
SRR000034 125.2M 457.0k
SRR000035 127.0M 463.0k
SRR000045 99.6M 368.2k
SRR000054 107.1M 392.8k
SRR000059 109.9M 403.1k
SRR000063 46.7M 172.6k
SRR000065 125.7M 459.0k