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Rice rhizosphere metagenome Raw sequence reads

Identifiers: SRA: SRP284453
BioProject: PRJNA663614
Study Type: 
Metagenomics
Abstract: Rice rhizophere soil metagenome samples from two parent lines (Francis and Rondo) and nine recombinant inbred lines (RILs) resulting from a cross of the parents (FR) under continuously flooded conditions. The parents display diverging methane emissions patterns (i.e. Francis is a low CH4 emitter and Rondo is a high CH4 emitter) as well as diverging agronomic traits (e.g. Francis is low biomass and Rondo is high biomass). The goal of this study was twofold; 1) determine genotypic impact on methane emissions and methane-cycling microbial community; 2) determine if biomass trait differences arising from genotypic differences influence the plant-beneficial microbial community structure.

Related SRA data

Experiments:
48 ( 48 samples )
Runs:
48 (76.1Gbp; 32.9Gb)
Additional objects:
File type count
fastq 48