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GSE37916: FAIRE-seq in primary human egakaryocytes, erythroblasts and monocytes

Identifiers: SRA: SRP013039
GEO: GSE37916
Study Type: 
Epigenetics
Submission: SRA052723 on 2012-05-11 11:47:00
Abstract: Summary: Maps of open chromatin in three primary human blood cell types of the myeloid lineage (megakaryocytes, erythroblasts and monocytes) using the formaldehyde-assisted isolation of regulatory elements method followed by next-generation sequencing (FAIRE-seq). We also generated FAIRE-seq data in the megakaryocytic cell line CHRF-288-11. In addition to our data sets, we retrieved FAIRE-seq data for the erythroblastoid cell line K562 (ENCODE Project Consortium 2012) and pancreatic islets (Gaulton et al. 2010), and reanalyzed these data sets using the same methodology. Overall Design: Genome-wide open chromatin profiles of megakaryocytes, erythroblasts and monocytes (in each 2 individuals), pancreatic islets (1 individual), CHRF 288-11 megakaryocytic cells (2 samples) and K562 erythroblastoid cells (2 samples).
Center Project: GSE37916: FAIRE-seq in primary human egakaryocytes, erythroblasts and monocytes
External Links: GEO Series
/gds:200037916

Related SRA data

Experiments:
8
Runs:
8 (49.0Gbp; 32.5Gb)