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TARGET: Acute Lymphoblastic Leukemia (ALL) Phase II

Identifiers: SRA: SRP011999
BioProject: PRJNA89529
dbGaP: phs000464
Study Type: 
Other
Abstract: There are 175 fully characterized patient cases with relapsed precursor B-cell ALL (all tumor/normal pairs, 85 with relapse sample as well) that will make up Phase II of the TARGET ALL dataset, each with gene expression, tumor and paired normal copy number analyses, and comprehensive next-generation sequencing to include whole genome sequencing, mRNA-seq and miRNA-seq. Subsets of these cases will also have methylation and/or whole exome sequencing data available as well. There are additionally a large number of cases with partial molecular characterization making this a large and informative genomic dataset. All cases can be sorted according to data type via the Case Matrix on the TARGET Data Matrix. Please visit the TARGET website listed above for additional information on this and other TARGET genomics projects. Please see the TARGET Publication Guidelines at the OCG websitefor updated details on sharing of any TARGET substudy data.

The SRA runs contain human sequence

These data are available through the dbGaP authorized access system.

Related SRA data

Experiments:
3654 ( 3309 samples )
Runs:
3877 (252.1Tbp; 147.4Tb)
Additional objects:
File type count
assembled contigs 5