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Human Microbiome Project (HMP) 16S rRNA Gene Diversity, the diversity of 16S ribosomal RNA genes in the human microbiome: 454 Protocol Validation - Clinical

Identifiers: SRA: SRP002396
BioProject: PRJNA48339
HMP-DACC: hmp_clinical_pilot_CEFoS_study
Study Type: 
Metagenomics
Submission: SRA012654 on 2010-05-06 10:00:00
Abstract: This HMP Centers'' evaluation of the default 454 SOP represents the pyrosequencing of 16S rRNA genes amplified from anonymized clinical stool samples distributed to each of the four HMP sequencing centers. The goal of the pilot was to test the provisional 454 sequencing protocol (v4.2) and to evaluate accuracy and consistency between centers. (Previously referred to as Centers Evaluation of 454 SOP (CEFoS) Clinical Pilot)
Center Project: human metagenome
External Link: NIH HMP DACC

The SRA runs have been pre-filtered by NCBI to remove contaminating human sequence.

These data are available through the dbGaP authorized access system.


Related SRA data

Experiments:
9
Runs:
69 (844.3Mbp; 1.7Gb)