skip to main content

GSE16013: Genome-wide maps of chromatin state in staged Drosophila embryos, ChIP-seq

Identifiers: SRA: SRP001424
GEO: GSE16013
GEO: GSE16013
Study Type: 
Epigenetics
Description: Summary: This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains ChIP-seq data generated on Solexa Genome Analyzer for 6 Histone modifications (H3K9me3, H3K27me3, H3K4me3, H3K4me1, H3K27Ac, H3K9Ac), PolII and CBP/p300. Each factor has been studied for 12 different time-points of Drosophila development. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: For each combination of time-point and antibody, triplicate ChIP experiments have been performed and hybridized on Agilent 244K arrays. The hybridizations have been verified by sequencing one replicate of IP and one replicate of Input following Solexa sequencing procedure.
Center Project: GSE16013: Genome-wide maps of chromatin state in staged Drosophila embryos, ChIP-seq
External Links: GEO Web Link
/gds:200016013

Related SRA data

Experiments:
114 ( 114 samples )
Runs:
114 (22.7Gbp; 14.8Gb)
Additional objects:
File type count
fastq 114