Paired-end sequencing of the genome of Escherichia coli K-12 strain MG1655 using the Illumina Genome Analyzer II
Identifiers: SRA: ERP000092
Whole Genome Sequencing
E. coli K-12 holds a key position as a model organism in studies of molecular biology, biochemistry, genetics and biotechnology. A high-quality reference sequence of the genome of E. coli K-12 strain MG1655 has previously been generated using the Sanger dideoxy sequencing method (Reference sequence accession: NC_000913). We have re-sequenced the genome of the MG1655 strain using the Illumina Genome Analyzer II to provide a paired-end, 100 base sequence dataset for development of de novo sequence assembly algorithms or other downstream analysis tools.
We generated a sequencing library with a median insert size of 214 bp following random fragmentation and gel fractionation of genomic DNA. 100 base sequence reads were generated from both ends of these templates using a single flowcell lane on the Illumina GA II. Sequence reads were aligned to the reference genome using ELAND.
|Escherichia coli str. K-12 substr. MG1655||SAMEA779983||200x100x100-081224_EAS20_0008_FC30TBBAAXX-6.tar.gz||2.3Gb||2013-06-28 23:57:41|
|Escherichia coli str. K-12 substr. MG1655||SAMEA779983||ERR008613.minhash.profile||39.1kb||2017-07-13 14:11:55|
|Escherichia coli str. K-12 substr. MG1655||SAMEA779983||ref_stats.tsv||7.1kb||2017-10-11 07:22:31|
|Escherichia coli str. K-12 substr. MG1655||SAMEA779983||wgmlst_sig.tsv||3.7Mb||2017-07-14 17:07:34|