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DRZ000007  Genomic contigs of a miniature tomato cultivar Micro-Tom

Description: 
Genomic contigs of a miniature tomato cultivar, Micro-Tom weregenerated by reference mapping to SL2.31 of Heinz genome sequencesfrom sol genomics network (http://solgenomics.net/) using thesoftwares of BWA (ver. 0.5.8a) and samtools (ver. 0.1.12a). Thecontigs of Micro-Tom were composed by single-end reads of Titanium(Roche Applied Science) and paired-end reads of HiSeq2000 (IlluminaInc.). Total number of contigs, the mean length of contigs and N50 was40,908, 17,862bp and 65,524bp, respectively.
Submission: submitted by KAZUSA on
Type: 
DE_NOVO_ASSEMBLY