skip to main content
Site map
All databases
Search
for
within
PubMed
Protein
Nucleotide
GSS
EST
Structure
Genome
Assembly
BioProject
BioSample
Books
Conserved Domains
ClinVar
Clone
dbGaP
DbVar
Epigenomics
Gene
GEO Datasets
GEO Profiles
HomoloGene
MedGen
MeSH
NLM Catalog
NCBI Web Site
OMIA
OMIM
PMC
PopSet
Probe
Protein Clusters
PubChem BioAssay
BioSystems
PubChem Compound
PubChem Substance
PubMed Health
SNP
SRA
Taxonomy
ToolKit
ToolKitAll
ToolKitBook
UniGene
UniSTS
Main
Taxonomy Tree View
List of Assemblies
Tracking
List of Submissions
Legend
Documentation
RFC
RFC (pdf-format)
XML Schema
FAQ
User Guide
Trace Archive
Main
Obtaining Data
Statistics
Tracking
Documentation
SRA
Main
Browse
Search
Download
Submit
Software
Trace BLAST
Warning: The NCBI web site requires JavaScript for full functionality.
more...
Assembly Id:
6135
Tax Id:
757008
Submitter:
JCVI
Consensuses Length:
18083
Submitter Reference:
jcvi-rtv-29676-2010-7-14-110819.aa
# Traces:
750
Assembly Name:
Rotavirus A human/USA/2007719698/2007/G1P[8]
# Contigs:
11
Date of load:
Aug 8 2010 12:11AM
Coverage:
19.62X
List of Contigs
Contig ID (CI)
Submitter Reference
Accession
Conformation
Consensus Length
# Traces
# Gaps
344296
RTVSP_JG_00025.VP1.3570.rtv
HM773766.1
LINEAR
3,269
90
3
344297
RTVSP_JG_00025.NSP2.3571.rtv
HM773773.1
LINEAR
1,023
51
3
344298
RTVSP_JG_00025.NSP1.3572.rtv
HM773770.1
LINEAR
1,519
136
18
344299
RTVSP_JG_00025.NSP5.3573.rtv
HM773776.1
LINEAR
631
28
0
344300
RTVSP_JG_00025.NSP4.3574.rtv
HM773775.1
LINEAR
708
44
1
344301
RTVSP_JG_00025.VP7.3575.rtv
HM773774.1
LINEAR
1,011
45
5
344302
RTVSP_JG_00025.VP6.3576.rtv
HM773771.1
LINEAR
1,320
64
3
344303
RTVSP_JG_00025.NSP3.3578.rtv
HM773772.1
LINEAR
1,025
48
0
344304
RTVSP_JG_00025.VP4.3579.rtv
HM773769.1
LINEAR
2,335
75
0
344305
RTVSP_JG_00025.VP3.3580.rtv
HM773768.1
LINEAR
2,516
81
3
344306
RTVSP_JG_00025.VP2.3581.rtv
HM773767.1
LINEAR
2,726
88
3